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PDBsum entry 4gbx

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Cleft analysis for: 4gbx PDB id
4gbx
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 27484.31 16.40 67.30 4 11.76 3 27.70 1 49 58 88 101 59 51 3 GLY 84[E], LYS 85[E], GLN 86[E],
ASN 87[E], CYS 88[E], LEU 89[E],
LYS 90[E], LEU 91[E], ALA 92[E], N
AG 201[A] (70 atoms)
2 1675.69 0.00 61.22 7 10.27 5 10.24 4 4 2 8 7 3 5 0  
3 1709.02 0.00 60.86 8 9.99 6 12.83 2 3 2 7 4 4 6 0  
4 1817.86 0.00 71.63 2 11.94 2 10.35 3 7 5 10 6 6 4 2  
5 1541.95 0.00 65.25 5 8.58 8 9.78 7 4 2 8 9 2 7 0  
6 1243.27 0.00 57.10 10 7.55 9 9.26 8 2 3 9 4 3 2 2  
7 787.22 0.00 75.93 1 12.61 1 10.18 5 3 1 7 7 1 1 0  
8 872.44 0.00 67.47 3 11.24 4 8.15 9 2 5 3 7 2 6 0  
9 657.70 0.00 60.29 9 8.83 7 10.07 6 1 2 7 2 1 1 0 NAG 202[A] (4 atoms)
10 502.88 0.00 65.10 6 5.64 10 6.06 10 2 3 3 6 1 2 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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