PDBsum entry 4g0d Go to PDB code:  Tunnel analysis for: 4g0d calculated with MOLE 2.0 PDB id 4g0d Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.27 1.66 30.8 -0.86 -0.34 11.6 87 4 1 2 3 1 0 0  PGO 511 D 2 1.28 1.65 38.8 0.12 -0.15 6.7 83 2 2 2 3 3 1 0   3 1.27 1.65 49.8 -1.46 -0.26 18.8 78 8 4 2 3 3 2 1  PGO 511 D PGO 516 D 4 1.36 2.61 17.3 0.57 0.36 9.7 68 1 2 0 4 2 0 0   5 1.38 2.57 18.9 -0.20 0.31 14.9 67 1 3 0 3 4 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.