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PDBsum entry 4fm5

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 4fm5 calculated with MOLE 2.0 PDB id
4fm5
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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21 tunnels, coloured by tunnel radius 15 tunnels, coloured by tunnel radius 15 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.28 213.7 -1.42 -0.24 16.6 80 22 7 17 17 12 2 0  702 BOG A,706 DF0 A,701 BOG B
2 1.27 20.1 -0.31 -0.38 8.0 73 1 1 1 3 0 3 0  
3 1.34 17.2 -1.24 -0.35 15.8 84 2 1 2 3 1 0 0  
4 1.60 7.9 0.35 -0.11 2.2 77 0 0 1 4 0 2 0  
5 1.55 9.7 0.52 -0.07 2.1 83 0 0 2 3 0 2 0  
6 1.54 10.0 -0.31 -0.13 10.4 82 1 1 3 2 1 0 0  
7 1.46 10.0 0.50 -0.08 2.1 77 0 0 1 4 0 2 0  
8 1.60 8.5 0.94 0.07 1.9 77 0 0 1 4 0 2 0  
9 1.56 9.4 0.85 -0.02 2.1 87 0 0 2 3 0 1 0  
10 1.52 8.8 0.94 0.07 2.0 81 0 0 1 4 0 1 0  
11 1.70 10.0 0.39 0.13 4.7 85 1 0 2 2 0 1 0  
12 1.73 8.8 0.86 0.29 3.0 80 1 0 2 2 1 1 0  
13 1.81 7.0 0.97 0.37 3.8 85 1 0 2 2 0 1 0  
14 1.49 11.3 0.11 0.16 3.1 76 1 0 2 2 2 1 0  
15 1.93 2.8 -0.03 0.09 16.9 78 1 1 0 1 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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