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Ligand clusters for UniProt code Q5SJ80

Ligand clusters for Q5SJ80: Cytochrome c oxidase subunit 2 OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=cbaB PE=1 SV=1

5 ligand clusters
Cluster 1.
2 ligand types
15 ligands
Cluster 2.
1 ligand type
14 ligands
Cluster 3.
1 ligand type
14 ligands
Cluster 4.
1 ligand type
12 ligands
Cluster 5.
1 ligand type
1 ligand
Representative protein: 1ehkB  
 

Structures

PDB   Schematic diagram
1ehkB    
4gp4B    
3s8gB    
4fa7B    
4g72B    
 more ...

 

 Cluster 1 contains 2 ligand types

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Ligand Description


 
1. Ligand: BNG × 1
B-Nonylglucoside
PDB code: 1ehk(B).


 
2. Ligand: OLC × 14
(2r)-2,3-Dihydroxypropyl (9z)-Octadec-9-Enoate
PDB codes: 3s8f(B), 3s8g(B), 4fa7(B), 4faa(B), 4g70(B), 4g71(B), 4g72(B), 4g7q(B), 4g7r(B), 4g7s(B), 4gp4(B), 4gp5(B), 4gp8(B), 4n4y(B).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: OLC × 14
(2r)-2,3-Dihydroxypropyl (9z)-Octadec-9-Enoate
PDB codes: 3s8f(B), 3s8g(B), 4fa7(B), 4faa(B), 4g70(B), 4g71(B), 4g72(B), 4g7q(B), 4g7r(B), 4g7s(B), 4gp4(B), 4gp5(B), 4gp8(B), 4n4y(B).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: OLC × 14
(2r)-2,3-Dihydroxypropyl (9z)-Octadec-9-Enoate
PDB codes: 3s8f(B), 3s8g(B), 4fa7(B), 4faa(B), 4g70(B), 4g71(B), 4g72(B), 4g7q(B), 4g7r(B), 4g7s(B), 4gp4(B), 4gp5(B), 4gp8(B), 4n4y(B).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: OLC × 12
(2r)-2,3-Dihydroxypropyl (9z)-Octadec-9-Enoate
PDB codes: 3s8f(B), 3s8g(B), 4faa(B), 4g70(B), 4g71(B), 4g72(B), 4g7q(B), 4g7r(B), 4g7s(B), 4gp4(B), 4gp5(B), 4n4y(B).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: OLC × 1
(2r)-2,3-Dihydroxypropyl (9z)-Octadec-9-Enoate
PDB code: 3s8g(B).

 

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