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PDBsum entry 4f65

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protein ligands Protein-protein interface(s) links
Transferase/transferase inhibitor PDB id
4f65

 

 

 

 

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Contents
Protein chains
279 a.a.
Ligands
SO4 ×4
EDO ×10
0S9 ×2
Waters ×190
PDB id:
4f65
Name: Transferase/transferase inhibitor
Title: Crystal structure of human fibroblast growth factor receptor 1 kinase domain in complex with compound 8
Structure: Fibroblast growth factor receptor 1. Chain: a, b. Fragment: kinase domain (unp residues 458-765). Synonym: fgfr-1, basic fibroblast growth factor receptor 1, bfgfr, bfgf-r-1, fms-like tyrosine kinase 2, flt-2, n-sam, proto-oncogenE C- fgr. Engineered: yes. Mutation: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: fgfr1, bfgfr, cek, fgfbr, flg, flt2, hbgfr. Expressed in: escherichia coli. Expression_system_taxid: 562
Resolution:
2.26Å     R-factor:   0.204     R-free:   0.236
Authors: R.A.Norman,J.Breed,D.Ogg
Key ref: R.A.Norman et al. (2012). Protein-ligand crystal structures can guide the design of selective inhibitors of the FGFR tyrosine kinase. J Med Chem, 55, 5003-5012. PubMed id: 22612866
Date:
14-May-12     Release date:   06-Jun-12    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
P11362  (FGFR1_HUMAN) -  Fibroblast growth factor receptor 1 from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
822 a.a.
279 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 1 residue position (black cross)

 Enzyme reactions 
   Enzyme class: E.C.2.7.10.1  - receptor protein-tyrosine kinase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H+
L-tyrosyl-[protein]
+ ATP
= O-phospho-L-tyrosyl-[protein]
+ ADP
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    Added reference    
 
 
J Med Chem 55:5003-5012 (2012)
PubMed id: 22612866  
 
 
Protein-ligand crystal structures can guide the design of selective inhibitors of the FGFR tyrosine kinase.
R.A.Norman, A.K.Schott, D.M.Andrews, J.Breed, K.M.Foote, A.P.Garner, D.Ogg, J.P.Orme, J.H.Pink, K.Roberts, D.A.Rudge, A.P.Thomas, A.G.Leach.
 
  ABSTRACT  
 
No abstract given.

 

 

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