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PDBsum entry 4f52

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Top Page protein metals Protein-protein interface(s) pores links
Pore analysis for: 4f52 calculated with MOLE 2.0 PDB id
4f52
Pores calculated on whole structure Pores calculated excluding ligands

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13 pores, coloured by radius 13 pores, coloured by radius 13 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.72 2.60 54.9 -0.18 0.04 16.2 77 6 4 2 9 3 0 0  
2 1.79 1.79 64.5 -1.19 -0.35 15.4 72 4 5 3 0 5 2 1  
3 1.28 1.73 77.3 -0.15 0.03 12.5 77 7 2 7 13 4 1 1  
4 1.26 2.08 85.5 -0.02 0.09 14.1 77 2 8 7 12 3 1 0  
5 2.11 2.29 87.5 -2.02 -0.51 19.0 82 6 7 11 3 3 1 0  
6 1.32 1.27 121.8 -0.55 -0.08 17.3 78 7 8 7 11 1 0 0  
7 1.79 1.79 138.0 -1.15 -0.27 15.8 80 6 3 7 6 5 2 0  
8 1.19 1.52 25.8 0.33 0.08 8.9 82 2 2 2 5 2 0 0  
9 1.19 3.41 26.4 1.95 0.67 5.5 72 1 0 0 9 3 0 0  
10 2.66 3.57 27.8 -1.07 -0.43 14.5 79 3 2 4 2 2 1 0  
11 1.42 2.28 40.9 -1.01 -0.46 7.7 83 1 3 6 5 3 1 0  
12 1.18 1.31 97.2 -0.33 0.16 12.5 78 6 2 8 13 5 0 1  
13 1.57 5.39 165.2 -1.23 -0.23 20.4 72 6 7 6 9 3 1 3  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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