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PDBsum entry 4f2s
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Pore analysis for: 4f2s calculated with  MOLE 2.0
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PDB id
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4f2s
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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11 pores,
coloured by radius |
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13 pores,
coloured by radius
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13 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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3.23 |
3.41 |
26.7 |
-2.21 |
-0.52 |
23.0 |
77 |
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2 |
5 |
2 |
2 |
1 |
2 |
0 |
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DG 24 B DT 2 C
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2 |
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1.99 |
2.32 |
28.6 |
-2.41 |
-0.68 |
30.6 |
79 |
2 |
2 |
2 |
3 |
0 |
0 |
0 |
DC 26 B DT 27 B DC 28 B DG 3 C
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3 |
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1.77 |
1.94 |
31.6 |
-1.37 |
-0.33 |
19.4 |
77 |
2 |
1 |
2 |
2 |
1 |
0 |
0 |
DT 23 B DG 24 B DA 25 B DC 26 B DG 3 C DG 4 C DA
6 C
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4 |
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1.18 |
1.18 |
33.4 |
-1.61 |
-0.75 |
18.8 |
83 |
3 |
2 |
1 |
1 |
0 |
1 |
0 |
DG 24 B DA 25 B DC 26 B DT 27 B DC 28 B DG 3 C DG
12 C
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5 |
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2.09 |
2.15 |
35.2 |
-1.02 |
-0.26 |
11.7 |
82 |
3 |
2 |
6 |
4 |
1 |
1 |
0 |
DG 24 B DT 2 C
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6 |
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2.10 |
2.14 |
52.4 |
-1.19 |
-0.29 |
13.8 |
82 |
4 |
5 |
7 |
6 |
1 |
2 |
0 |
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7 |
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2.26 |
3.53 |
58.4 |
-1.12 |
-0.18 |
17.1 |
79 |
4 |
5 |
3 |
5 |
2 |
2 |
0 |
DT 23 B DG 24 B
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8 |
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2.08 |
2.11 |
78.1 |
-0.79 |
-0.16 |
12.8 |
82 |
5 |
3 |
7 |
7 |
2 |
1 |
0 |
DT 23 B DG 24 B DA 6 C
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9 |
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1.61 |
1.61 |
78.7 |
-1.26 |
-0.43 |
16.2 |
79 |
3 |
8 |
4 |
5 |
2 |
2 |
0 |
DC 21 B DC 22 B DA 6 C DG 7 C DT 8 C DC 9 C GLC 1
G FRU 2 G
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10 |
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1.65 |
1.65 |
87.2 |
-0.90 |
-0.31 |
12.2 |
81 |
4 |
5 |
8 |
7 |
2 |
1 |
0 |
DC 21 B DC 22 B DA 6 C DG 7 C DT 8 C DC 9 C GLC 1
G FRU 2 G
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11 |
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1.40 |
1.44 |
26.4 |
-1.12 |
-0.71 |
10.0 |
92 |
2 |
0 |
2 |
0 |
0 |
1 |
0 |
DG 24 E DA 25 E DC 26 E DG 4 F DA 6 F DG 12 F
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12 |
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1.19 |
1.25 |
28.2 |
-1.08 |
-0.55 |
13.8 |
87 |
3 |
1 |
3 |
1 |
1 |
0 |
0 |
DG 24 E DC 26 E DT 2 F DG 3 F DG 4 F DA 6 F
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13 |
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1.39 |
1.44 |
33.0 |
-1.13 |
-0.63 |
10.6 |
84 |
3 |
1 |
2 |
0 |
1 |
1 |
0 |
DG 24 E DA 25 E DC 26 E DG 4 F DA 6 F
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program