 |
PDBsum entry 4eoz
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 4eoz calculated with MOLE 2.0
|
PDB id
|
|
|
|
4eoz
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Tunnels calculated on whole structure |
 |
Tunnels calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
5 tunnels,
coloured by tunnel radius |
 |
10 tunnels,
coloured by
tunnel radius
|
10 tunnels,
coloured as in list below
|
|
|
 |
 |
 |
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.74 |
1.99 |
25.3 |
0.73 |
0.34 |
15.7 |
83 |
 |
4 |
1 |
1 |
6 |
0 |
0 |
0 |
 |
MSE 116 D
|
 |
 |
2 |
 |
1.45 |
1.64 |
27.3 |
0.85 |
0.22 |
10.2 |
88 |
3 |
0 |
2 |
6 |
0 |
0 |
0 |
MSE 116 D
|
 |
3 |
 |
1.43 |
1.43 |
17.9 |
0.75 |
0.10 |
2.0 |
86 |
0 |
0 |
2 |
3 |
2 |
0 |
0 |
MSE 273 B
|
 |
4 |
 |
1.45 |
1.45 |
17.9 |
0.86 |
0.17 |
1.9 |
88 |
0 |
0 |
2 |
4 |
2 |
0 |
0 |
MSE 273 B
|
 |
5 |
 |
1.04 |
1.04 |
17.5 |
0.49 |
0.03 |
12.4 |
88 |
2 |
1 |
0 |
4 |
0 |
0 |
0 |
MSE 64 B
|
 |
6 |
 |
1.15 |
1.32 |
17.9 |
0.30 |
0.28 |
8.5 |
69 |
1 |
1 |
0 |
4 |
1 |
0 |
0 |
MSE 64 B
|
 |
7 |
 |
1.40 |
1.40 |
15.7 |
-0.35 |
-0.11 |
15.9 |
65 |
2 |
1 |
0 |
3 |
1 |
1 |
0 |
|
 |
8 |
 |
1.38 |
1.81 |
23.2 |
-0.89 |
0.08 |
21.3 |
85 |
3 |
1 |
2 |
4 |
1 |
0 |
0 |
MSE 116 B
|
 |
9 |
 |
1.38 |
1.82 |
25.6 |
-1.34 |
-0.05 |
25.1 |
82 |
4 |
1 |
2 |
4 |
1 |
0 |
0 |
MSE 116 B
|
 |
10 |
 |
1.40 |
1.88 |
25.9 |
-0.79 |
-0.03 |
20.5 |
87 |
2 |
2 |
3 |
6 |
1 |
0 |
0 |
MSE 116 B
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |