PDBsum entry 4ed8 Go to PDB code:  Pore analysis for: 4ed8 calculated with MOLE 2.0 PDB id 4ed8 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.48 1.56 26.1 -1.64 -0.53 19.4 89 4 0 2 0 1 0 0  DG 4 P DT 5 P DG 7 T DA 8 T DC 9 T 2 2.14 2.14 28.3 -0.54 -0.11 15.8 82 3 0 1 1 1 0 0  DT 5 P DC 6 P DT 8 P DA 2 T DT 6 T DG 7 T DA 8 T DC 9 T 3 2.03 2.14 35.7 -1.63 -0.54 16.1 79 3 1 4 2 0 1 0  DG 2 P DG 4 P DT 5 P DC 6 P DT 8 P DA 9 P DTP 501 P DA 2 T DG 10 T DC 11 T DG 12 T 4 1.35 1.43 44.8 -1.17 -0.10 26.7 77 8 6 1 3 2 1 0  CA 503 A MG 504 A DT 8 P DA 9 P DTP 501 P DA 2 T DA 5 T DT 6 T 5 1.35 1.44 47.7 -1.30 -0.45 18.8 89 4 4 4 2 0 1 0  DC 6 P DA 7 P DT 8 P DA 9 P DA 5 T DT 6 T DG 7 T DA 8 T DC 9 T DG 10 T DC 11 T DG 12 T 6 1.13 1.85 34.6 0.97 0.13 3.4 72 0 1 2 8 0 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.