PDBsum entry 4ed6 Go to PDB code:  Pore analysis for: 4ed6 calculated with MOLE 2.0 PDB id 4ed6 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.36 1.54 31.7 -2.06 -0.65 24.5 84 5 2 1 1 0 0 0  DC 6 P DA 7 P DT 8 P DG 7 T DA 8 T DC 9 T DG 10 T DC 11 T DT 12 T 2 1.96 1.96 32.7 -0.70 -0.08 18.8 78 5 0 2 2 1 0 1  DA 1 P DG 2 P DC 3 P DG 4 P DT 5 P DC 6 P DT 8 P DT 3 T DG 7 T DA 8 T DC 9 T DG 10 T DC 11 T 3 1.49 1.63 35.5 -1.80 -0.43 14.8 81 4 1 2 0 1 1 0  DC 6 P DT 8 P DA 2 T DT 3 T DT 4 T 4 1.29 1.44 43.3 -1.68 -0.54 23.9 84 6 6 2 2 0 1 0  DT 8 P DA 9 P DT 6 T DG 7 T 5 1.30 1.44 46.2 -1.47 -0.51 20.8 85 5 4 2 2 0 1 0  DA 7 P DT 8 P DA 9 P DT 3 T DT 6 T DG 7 T 6 1.31 1.44 46.7 -1.62 -0.50 21.4 89 5 4 3 3 0 1 0  DC 6 P DA 7 P DA 9 P DT 6 T DG 7 T DA 8 T DC 9 T DG 10 T DC 11 T DT 12 T 7 2.40 2.40 48.9 -1.81 -0.69 18.1 86 5 1 2 0 0 0 0  DG 4 P DT 5 P DC 6 P DT 8 P DT 3 T DC 9 T DG 10 T DC 11 T DT 12 T Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.