PDBsum entry 4ed1 Go to PDB code:  Pore analysis for: 4ed1 calculated with MOLE 2.0 PDB id 4ed1 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.37 1.53 34.0 -1.30 -0.39 18.4 81 4 0 1 0 1 0 1  DC 3 P DG 4 P DC 9 T 2 1.33 1.53 47.2 -0.97 -0.49 15.9 75 5 0 1 2 0 0 0  DC 3 P DG 4 P DT 5 P DC 6 P DA 7 P DT 8 P DT 3 T 3 1.98 1.98 59.1 -0.91 -0.25 18.1 76 8 0 1 2 1 0 1  DG 4 P DT 5 P DC 6 P DA 7 P DT 8 P DT 3 T DA 8 T DC 9 T 4 1.11 1.40 69.2 -1.02 -0.25 10.7 65 4 0 1 2 2 1 0  DC 6 P DA 7 P DT 8 P DA 2 T DT 3 T DT 4 T 5 1.13 1.43 79.7 -0.49 0.04 9.5 76 6 0 4 2 4 1 1  DG 4 P DT 5 P DA 2 T DT 3 T DT 4 T DT 6 T DG 7 T DA 8 T DC 9 T Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.