PDBsum entry 4ebe Go to PDB code:  Tunnel analysis for: 4ebe calculated with MOLE 2.0 PDB id 4ebe Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.95 1.95 22.8 -0.08 0.14 16.3 72 3 1 1 2 1 0 0  DTP 501 A DC 6 P DOC 7 P DT 4 T DG 5 T 2 1.96 1.96 29.4 -0.51 0.42 16.3 71 4 0 1 2 2 0 0  DTP 501 A DC 6 P DOC 7 P DT 4 T DG 5 T GOL 501 T 3 1.55 1.66 44.7 -1.83 -0.11 20.3 78 3 3 3 1 3 1 0  DTP 501 A DOC 7 P DT 4 T DG 5 T DG 6 T DG 7 T 4 1.43 3.08 15.7 1.03 0.39 11.0 73 2 0 0 5 1 1 1   5 1.50 3.19 17.0 1.93 0.63 7.4 79 1 0 1 5 1 0 1   6 1.24 1.45 19.2 1.77 0.37 5.3 81 2 0 0 5 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.