PDBsum entry 4e7x

Tunnel analysis for: 4e7x calculated with

MOLE 2.0

PDB id

4e7x

Tunnels calculated on whole structure

Tunnels calculated excluding ligands

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MOLEonline 2.0 manipulation
and
visualization
with HETATM:

without HETATM:

6 tunnels, coloured by tunnel radius

6 tunnels, coloured by tunnel radius

6 tunnels, coloured as in
list below

Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.

Tunnels

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.54

1.55

18.3

-0.62

0.00

8.2

86

2

1

3

2

2

0

0

2

1.54

1.56

20.0

-1.02

-0.39

11.3

87

1

2

5

1

2

1

0

3

1.49

1.52

25.7

-0.93

-0.03

15.4

84

3

1

3

3

2

1

0

4

1.39

1.57

40.5

-0.24

-0.26

12.8

82

2

3

4

6

2

0

0

5

1.26

1.42

17.1

-0.01

-0.26

12.6

78

0

2

0

3

2

0

0

6

1.83

1.83

20.3

-0.22

0.02

15.0

80

2

2

2

2

1

0

1

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Tunnels were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.