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PDBsum entry 4e7h

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Top Page protein dna_rna ligands metals Protein-protein interface(s) pores links
Pore analysis for: 4e7h calculated with MOLE 2.0 PDB id
4e7h
Pores calculated on whole structure Pores calculated excluding ligands

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6 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.51 1.76 35.4 -1.68 -0.35 17.2 72 4 0 1 0 2 3 0  SO4 408 A DT 3 C DT 5 C DC 6 C GOL 101 C DA 12 D
DT 13 D
2 1.57 1.74 88.3 -1.29 -0.34 16.2 83 5 4 5 7 2 1 0  DG 9 C DT 8 D DT 9 D DC 10 D DC 11 D
3 1.77 2.45 175.3 -0.68 -0.17 14.3 82 5 4 10 13 5 3 0  GOL 402 A SO4 404 A SO4 405 A SO4 401 B DA 15 D
DC 16 D DA 17 D DA 18 D DT 19 D
4 1.56 1.85 245.9 -0.97 -0.29 15.0 79 11 3 7 13 6 7 0  GOL 402 A SO4 405 A DT 3 C DT 5 C DC 6 C DA 7 C
DT 8 C DA 15 D DC 16 D DA 17 D DA 18 D DT 19 D G
OL 101 D

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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