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PDBsum entry 4e54
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Pore analysis for: 4e54 calculated with MOLE 2.0
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PDB id
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4e54
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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13 pores,
coloured by radius |
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23 pores,
coloured by radius
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23 pores,
coloured as in list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.37 |
2.37 |
30.8 |
-0.45 |
-0.48 |
3.0 |
101 |
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0 |
0 |
1 |
2 |
0 |
0 |
0 |
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DG 6 F DT 7 F DA 8 F DT 9 F DG 10 F DT 12 F DG 10 G 3DR 11 G DC 12 G DA 13 G DC 23 G
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2 |
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1.38 |
1.44 |
32.8 |
-1.22 |
-0.41 |
16.0 |
81 |
4 |
2 |
2 |
3 |
0 |
1 |
1 |
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3 |
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2.51 |
2.51 |
40.7 |
-1.88 |
-0.61 |
20.5 |
90 |
2 |
0 |
2 |
1 |
0 |
0 |
0 |
DG 6 F DT 7 F DA 8 F DT 9 F DG 10 F DT 12 F DG 10 G 3DR 11 G DC 12 G DA 13 G DT 14 G DC 15 G DA 16 G DT 17 G
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4 |
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1.40 |
1.59 |
52.0 |
-1.04 |
-0.23 |
18.8 |
85 |
6 |
1 |
7 |
4 |
1 |
1 |
0 |
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5 |
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1.10 |
1.10 |
53.4 |
-1.89 |
-0.24 |
25.2 |
79 |
9 |
2 |
3 |
6 |
0 |
2 |
0 |
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6 |
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1.32 |
1.57 |
55.7 |
-1.52 |
-0.51 |
23.6 |
82 |
5 |
5 |
4 |
6 |
0 |
1 |
0 |
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7 |
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1.35 |
1.43 |
113.3 |
-1.97 |
-0.41 |
21.6 |
76 |
15 |
5 |
6 |
5 |
2 |
7 |
0 |
DG 10 F DT 12 F DC 9 G DG 10 G DC 12 G DA 13 G
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8 |
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1.63 |
1.72 |
116.4 |
-1.90 |
-0.38 |
21.8 |
76 |
15 |
5 |
6 |
6 |
2 |
7 |
1 |
DG 6 F DT 7 F DA 13 G DT 14 G DC 15 G DA 16 G DT 17 G
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9 |
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1.35 |
1.41 |
118.2 |
-1.68 |
-0.53 |
19.1 |
83 |
9 |
8 |
7 |
5 |
1 |
4 |
0 |
DG 10 F DT 12 F DC 9 G DG 10 G DC 12 G DA 13 G
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10 |
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1.52 |
1.64 |
121.4 |
-1.63 |
-0.50 |
19.4 |
82 |
9 |
8 |
7 |
6 |
1 |
4 |
1 |
DG 6 F DT 7 F DA 13 G DT 14 G DC 15 G DA 16 G DT 17 G
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11 |
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1.23 |
1.34 |
121.2 |
-1.45 |
-0.45 |
21.2 |
81 |
6 |
10 |
4 |
5 |
2 |
2 |
2 |
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12 |
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1.32 |
1.44 |
129.5 |
-1.47 |
-0.36 |
17.4 |
78 |
12 |
7 |
6 |
6 |
4 |
8 |
0 |
DG 10 F DT 12 F DC 9 G DG 10 G DC 12 G DA 13 G
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13 |
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1.72 |
1.87 |
132.7 |
-1.42 |
-0.33 |
17.8 |
77 |
12 |
7 |
6 |
7 |
4 |
8 |
1 |
DG 6 F DT 7 F DA 13 G DT 14 G DC 15 G DA 16 G DT 17 G
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14 |
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1.04 |
1.20 |
130.5 |
-1.76 |
-0.46 |
24.4 |
79 |
10 |
8 |
5 |
7 |
2 |
1 |
2 |
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15 |
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1.04 |
1.20 |
137.1 |
-1.39 |
-0.30 |
18.7 |
77 |
14 |
6 |
7 |
10 |
4 |
7 |
1 |
DG 6 F DT 7 F DA 13 G DT 14 G DC 23 G
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16 |
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1.25 |
1.82 |
141.0 |
-1.52 |
-0.48 |
19.1 |
80 |
10 |
15 |
10 |
7 |
4 |
3 |
1 |
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17 |
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1.23 |
1.37 |
172.8 |
-0.93 |
-0.11 |
20.4 |
76 |
10 |
8 |
3 |
8 |
5 |
3 |
1 |
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18 |
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1.25 |
1.33 |
182.2 |
-1.55 |
-0.32 |
19.6 |
77 |
16 |
7 |
6 |
9 |
6 |
8 |
2 |
DG 10 F DT 12 F DG 10 G DC 12 G DA 13 G
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19 |
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1.22 |
1.36 |
200.1 |
-1.57 |
-0.46 |
20.0 |
81 |
11 |
16 |
9 |
8 |
5 |
3 |
3 |
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20 |
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2.17 |
2.66 |
204.1 |
-1.95 |
-0.56 |
22.8 |
87 |
13 |
18 |
15 |
9 |
2 |
2 |
0 |
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21 |
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1.71 |
1.99 |
246.6 |
-2.11 |
-0.45 |
25.4 |
83 |
22 |
17 |
15 |
9 |
4 |
6 |
0 |
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22 |
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1.83 |
1.96 |
233.2 |
-1.72 |
-0.42 |
21.8 |
82 |
18 |
17 |
11 |
8 |
6 |
4 |
1 |
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23 |
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1.36 |
1.46 |
248.2 |
-1.81 |
-0.48 |
22.2 |
83 |
23 |
12 |
12 |
9 |
4 |
5 |
0 |
DG 10 F DT 12 F DC 9 G DG 10 G DC 12 G DA 13 G
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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