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PDBsum entry 4dz2

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 4dz2 calculated with MOLE 2.0 PDB id
4dz2
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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13 tunnels, coloured by tunnel radius 10 tunnels, coloured by tunnel radius 10 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 2.49 17.7 -0.93 0.46 12.3 59 2 1 0 0 4 0 0  200 FK5 A,200 FK5 B
2 2.50 18.1 -0.43 0.54 10.9 68 2 1 0 2 4 0 0  200 FK5 A,200 FK5 B
3 2.86 19.9 -0.11 0.56 2.0 58 0 0 0 2 6 1 0  200 FK5 A,200 FK5 B
4 2.71 20.5 0.19 0.64 1.9 65 0 0 0 3 5 1 0  200 FK5 A,200 FK5 B
5 2.51 21.1 -0.55 0.41 12.0 69 1 2 0 2 4 0 0  200 FK5 A,200 FK5 B
6 2.49 21.6 -0.12 0.48 11.3 75 1 2 0 4 4 0 0  200 FK5 A,200 FK5 B
7 2.09 3.1 -0.56 -0.48 13.6 87 2 1 0 1 0 0 0  
8 1.82 7.4 -1.98 -0.89 26.6 78 1 2 0 0 0 0 0  
9 1.81 9.2 -1.16 -0.66 18.1 82 2 2 0 1 0 0 0  
10 1.46 5.1 0.57 0.10 1.9 71 0 0 1 2 2 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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