PDBsum entry 4dx9 Go to PDB code:  Pore analysis for: 4dx9 calculated with MOLE 2.0 PDB id 4dx9 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   27 pores, coloured by radius 27 pores, coloured by radius 27 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.09 2.27 58.6 -0.61 -0.17 12.8 76 0 3 3 6 3 1 0   2 1.29 2.17 101.5 -0.51 0.01 11.3 78 1 8 8 8 6 0 0   3 1.30 2.12 128.1 -1.42 -0.37 22.9 79 9 13 8 14 2 2 1   4 1.26 2.34 146.0 0.82 0.26 5.8 81 7 2 7 23 5 0 3  MSE 112 q MSE 112 s MSE 141 s 5 1.80 1.79 142.0 -1.42 -0.37 21.8 78 8 16 10 13 6 2 1   6 1.37 1.54 161.5 -1.20 -0.19 19.5 78 14 12 12 14 7 2 2   7 1.38 1.55 181.2 -0.63 -0.08 15.1 77 8 13 12 21 7 2 0   8 1.24 1.41 193.0 -0.61 -0.13 14.4 79 13 10 9 20 8 5 1   9 1.71 1.73 193.4 -1.63 -0.36 22.6 77 14 13 8 8 6 3 2   10 1.23 1.41 221.2 -0.61 -0.13 16.8 78 12 11 5 19 7 5 0   11 1.56 2.06 231.5 -0.88 -0.05 19.4 76 11 12 6 21 8 6 1  MSE 112 y MSE 141 y 12 1.25 1.55 223.6 -0.60 -0.08 15.5 79 14 15 12 25 11 3 1   13 1.21 2.59 275.5 -0.72 -0.16 13.5 78 11 12 10 20 12 3 2  MSE 112 q 14 1.33 2.37 280.7 -0.68 -0.11 13.3 79 14 16 18 27 16 1 3  MSE 112 q 15 1.37 1.44 289.8 -0.85 -0.19 15.4 79 15 14 10 20 10 4 1   16 0.88 1.69 294.5 0.37 0.09 10.1 79 10 10 12 34 10 1 1  MSE 112 o MSE 141 o MSE 112 s MSE 141 s 17 1.34 1.97 305.8 -1.64 -0.37 21.9 78 16 18 11 12 8 3 1   18 1.39 1.65 311.2 -1.16 -0.29 18.7 78 19 21 15 22 10 4 3  MSE 112 q 19 1.31 1.55 325.1 -1.26 -0.21 17.1 77 18 17 19 19 12 2 2   20 1.39 2.09 333.3 -1.27 -0.33 17.8 79 18 17 16 18 9 1 2  MSE 141 s 21 1.37 1.53 324.6 -1.23 -0.33 18.7 79 17 17 15 20 9 2 1  MSE 141 s 22 1.21 1.20 333.0 -0.98 -0.26 19.3 80 20 21 13 19 10 2 2  MSE 112 A 23 1.39 1.55 343.8 -0.90 -0.16 15.1 79 19 16 21 25 12 1 2  MSE 141 s 24 1.51 1.51 397.2 -0.73 -0.14 16.2 78 16 18 14 32 12 6 1  MSE 141 s MSE 112 y MSE 141 y 25 1.19 1.33 436.1 -1.11 -0.24 19.1 79 21 22 15 21 15 4 1  MSE 112 A 26 1.17 1.19 500.9 -1.09 -0.23 17.7 79 22 25 20 23 18 2 2  MSE 112 A 27 1.99 2.19 26.0 1.46 0.53 6.4 76 1 1 0 9 1 0 2  MSE 112 2 MSE 141 2 Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.