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PDBsum entry 4dx5
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Pore analysis for: 4dx5 calculated with  MOLE 2.0
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PDB id
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4dx5
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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25 pores,
coloured by radius |
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27 pores,
coloured by radius
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27 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.15 |
2.32 |
38.9 |
-0.37 |
-0.41 |
4.1 |
85 |
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1 |
1 |
4 |
3 |
2 |
1 |
0 |
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2 |
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1.48 |
1.48 |
57.5 |
-1.57 |
-0.41 |
18.2 |
83 |
5 |
5 |
8 |
6 |
1 |
0 |
0 |
MIY 1103 B GOL 1116 B
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3 |
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2.02 |
2.19 |
66.0 |
-2.56 |
-0.73 |
28.7 |
88 |
5 |
7 |
5 |
1 |
1 |
0 |
0 |
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4 |
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1.38 |
2.61 |
86.8 |
-0.52 |
-0.12 |
8.3 |
81 |
5 |
4 |
13 |
8 |
6 |
1 |
0 |
MIY 1103 B LMU 1114 B GOL 1116 B
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5 |
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1.98 |
2.15 |
87.9 |
-2.71 |
-0.53 |
30.4 |
82 |
12 |
7 |
5 |
2 |
2 |
1 |
0 |
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6 |
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2.00 |
2.02 |
90.1 |
-1.16 |
-0.63 |
12.3 |
86 |
3 |
5 |
6 |
5 |
2 |
4 |
0 |
LMT 1111 B LMU 1114 B
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7 |
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2.32 |
2.44 |
90.1 |
-2.44 |
-0.54 |
29.0 |
82 |
8 |
8 |
4 |
1 |
3 |
1 |
0 |
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8 |
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1.33 |
1.37 |
92.6 |
-1.50 |
-0.73 |
14.8 |
83 |
2 |
8 |
5 |
3 |
0 |
2 |
0 |
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9 |
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1.92 |
1.96 |
107.2 |
-0.47 |
-0.23 |
12.5 |
82 |
5 |
9 |
5 |
9 |
6 |
4 |
0 |
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10 |
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1.58 |
1.79 |
106.4 |
-1.15 |
-0.55 |
10.8 |
88 |
5 |
6 |
9 |
4 |
0 |
4 |
0 |
LMT 1103 A
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11 |
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1.42 |
1.42 |
110.0 |
-1.17 |
-0.46 |
9.8 |
84 |
5 |
6 |
18 |
7 |
6 |
4 |
0 |
MIY 1103 B LMT 1111 B LMU 1114 B GOL 1116 B
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12 |
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1.32 |
1.77 |
115.5 |
-1.31 |
-0.40 |
11.9 |
83 |
8 |
7 |
18 |
6 |
5 |
2 |
0 |
GOL 1101 A
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13 |
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1.31 |
1.43 |
116.7 |
-2.21 |
-0.72 |
19.0 |
89 |
8 |
9 |
16 |
3 |
1 |
2 |
0 |
GOL 1110 A GOL 1101 C
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14 |
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3.21 |
4.11 |
116.8 |
-0.15 |
-0.08 |
9.0 |
80 |
5 |
4 |
6 |
11 |
4 |
6 |
0 |
LMT 1103 A
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15 |
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1.30 |
1.34 |
119.6 |
-1.48 |
-0.68 |
12.4 |
88 |
5 |
8 |
18 |
4 |
2 |
2 |
0 |
GOL 1115 C
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16 |
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1.57 |
1.78 |
123.1 |
-1.23 |
-0.33 |
20.4 |
83 |
11 |
9 |
5 |
11 |
3 |
1 |
0 |
LMT 1102 A GOL 1101 B GOL 202 D
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17 |
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1.31 |
1.29 |
126.5 |
-2.11 |
-0.69 |
17.6 |
88 |
9 |
9 |
18 |
4 |
2 |
2 |
0 |
GOL 1110 A GOL 1101 C
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18 |
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1.39 |
1.67 |
127.4 |
-1.05 |
-0.34 |
10.3 |
85 |
8 |
6 |
18 |
8 |
5 |
2 |
0 |
GOL 1101 A
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19 |
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1.41 |
1.66 |
135.2 |
-1.10 |
-0.50 |
8.4 |
86 |
5 |
7 |
20 |
7 |
5 |
2 |
0 |
GOL 1101 A LMT 1103 A
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20 |
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1.31 |
1.29 |
140.6 |
-2.06 |
-0.72 |
17.4 |
87 |
7 |
10 |
17 |
3 |
3 |
2 |
0 |
GOL 1110 A GOL 1101 C
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21 |
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2.34 |
2.35 |
139.2 |
-0.58 |
-0.36 |
11.8 |
79 |
3 |
10 |
6 |
11 |
5 |
4 |
0 |
LMT 1103 A
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22 |
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1.55 |
1.77 |
152.8 |
-1.66 |
-0.41 |
19.8 |
84 |
13 |
10 |
10 |
8 |
5 |
4 |
0 |
LMT 1111 B LMU 1114 B GOL 201 D GOL 202 D
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23 |
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1.46 |
1.45 |
176.8 |
-1.63 |
-0.38 |
18.4 |
83 |
17 |
10 |
19 |
11 |
7 |
1 |
0 |
MIY 1103 B LMU 1114 B GOL 1116 B GOL 201 D GOL
202 D
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24 |
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1.32 |
2.00 |
181.3 |
-0.96 |
-0.35 |
8.9 |
81 |
7 |
6 |
22 |
14 |
9 |
4 |
0 |
GOL 1101 A LMT 1103 A
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25 |
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1.67 |
1.83 |
184.0 |
-1.71 |
-0.40 |
22.4 |
84 |
16 |
10 |
10 |
10 |
5 |
2 |
0 |
LMU 1114 B GOL 201 D GOL 202 D
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26 |
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1.22 |
1.51 |
372.1 |
-1.37 |
-0.43 |
17.2 |
82 |
23 |
20 |
21 |
20 |
10 |
8 |
0 |
LMU 1114 B SO4 1118 C GOL 201 D GOL 202 D
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27 |
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1.31 |
3.28 |
42.3 |
-1.57 |
-0.31 |
22.7 |
77 |
4 |
3 |
3 |
2 |
1 |
0 |
0 |
OCT 1106 C
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program