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PDBsum entry 4duo

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Cleft analysis for: 4duo PDB id
4duo
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 3793.50 0.81 70.11 1 13.87 1 17.21 1 12 11 10 9 8 8 0 XYL 403[A] (9 atoms)
2 4688.30 0.00 63.37 5 11.53 2 11.19 3 9 9 11 18 8 12 0  
3 1930.92 0.00 57.99 9 10.01 3 9.38 5 3 7 3 11 3 1 0  
4 1802.25 0.00 66.75 3 9.80 4 12.34 2 8 7 4 6 4 2 0  
5 1535.20 0.00 59.53 8 6.94 6 10.12 4 6 4 2 10 2 5 0  
6 707.06 0.00 63.08 7 7.67 5 6.60 9 4 5 1 2 0 0 0  
7 430.73 0.00 68.05 2 4.25 10 7.06 7 4 3 0 4 0 3 0  
8 534.09 0.00 63.21 6 4.78 8 7.03 8 4 4 2 5 0 1 0  
9 441.70 0.00 56.15 10 4.62 9 7.20 6 1 1 2 4 1 3 0  
10 403.31 0.00 63.67 4 4.90 7 5.91 10 3 3 2 2 3 1 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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