PDBsum entry 4dmb Go to PDB code:  Tunnel analysis for: 4dmb calculated with MOLE 2.0 PDB id 4dmb Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   1 tunnel, coloured by tunnel radius 2 tunnels, coloured by tunnel radius 2 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.22 2.44 67.0 0.34 0.09 13.7 71 5 5 0 16 2 0 1  MSE 58 A NO3 301 A MSE 50 B MSE 53 B MSE 56 B MSE 58 B MSE 79 B 2 1.29 2.60 68.6 0.37 0.08 13.3 71 5 5 0 16 2 0 1  MSE 58 A NO3 301 A MSE 50 B MSE 53 B MSE 56 B MSE 58 B MSE 79 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.