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PDBsum entry 4dgr

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Tunnel analysis for: 4dgr calculated with MOLE 2.0 PDB id
4dgr
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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10 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 2.02 8.2 -3.78 -0.49 47.2 88 5 1 0 0 0 0 0  
2 1.35 8.4 -0.50 0.23 8.3 79 1 0 2 4 1 0 0  
3 1.53 17.6 -0.52 0.22 5.6 71 1 0 3 4 2 1 0  
4 2.69 5.2 1.20 -0.13 0.6 93 0 0 1 3 0 1 0  
5 1.72 9.1 -0.96 0.14 15.0 72 1 1 0 1 2 0 0  
6 1.47 3.8 -0.36 0.20 11.7 97 1 0 1 1 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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