PDBsum entry 4ddv Go to PDB code:  Pore analysis for: 4ddv calculated with MOLE 2.0 PDB id 4ddv Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   16 pores, coloured by radius 16 pores, coloured by radius 16 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.21 1.22 36.6 0.11 -0.14 9.6 85 1 4 3 5 1 2 0   2 1.89 2.33 43.8 -2.82 -0.62 32.2 77 7 3 2 1 1 1 0   3 1.50 2.26 44.2 -0.39 0.01 16.9 88 4 2 1 7 1 0 0   4 2.31 3.86 49.0 -2.78 -0.71 26.2 78 7 1 2 0 0 1 0   5 1.25 1.79 52.5 -1.52 -0.24 28.9 75 6 4 0 4 1 0 0   6 2.17 2.34 77.8 -1.98 -0.59 29.4 86 9 7 2 4 1 0 0   7 1.31 1.50 79.3 -0.92 -0.19 20.3 85 9 3 2 9 1 2 0   8 1.50 2.31 83.1 -1.13 -0.08 24.0 89 12 5 5 8 1 0 0   9 2.19 3.62 89.2 -2.01 -0.18 29.2 89 11 5 5 5 1 0 0   10 1.19 1.21 96.5 -1.41 -0.18 31.4 79 11 7 0 8 0 0 0   11 1.19 1.64 139.9 -1.86 -0.41 29.8 79 11 14 1 9 3 1 0   12 1.16 1.73 138.6 -2.30 -0.52 33.9 79 15 15 1 7 2 1 0   13 1.16 1.65 148.0 -1.13 -0.19 24.9 81 14 12 2 13 3 1 0   14 1.57 2.10 28.7 -2.24 -0.39 30.1 89 7 3 5 3 1 0 0   15 1.85 2.78 33.1 -2.66 -0.40 23.9 81 6 1 5 0 2 1 0   16 1.57 2.08 47.6 -3.00 -0.48 36.0 83 10 5 5 3 2 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.