PDBsum entry 4ddv Go to PDB code:  Tunnel analysis for: 4ddv calculated with MOLE 2.0 PDB id 4ddv Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   11 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.27 1.48 25.1 -2.82 -0.42 35.8 87 6 3 3 3 0 0 0   2 1.22 1.52 29.8 -1.59 -0.37 27.4 84 4 5 2 4 0 1 0   3 1.29 1.52 30.3 -2.52 -0.31 30.3 85 8 3 3 3 2 0 0   4 1.22 1.56 34.9 -2.38 -0.58 31.8 85 5 7 2 2 0 3 0   5 1.23 3.04 15.4 2.72 0.89 0.8 80 0 0 2 6 2 0 0   6 1.17 2.88 16.9 2.93 0.87 0.7 83 0 0 2 8 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.