PDBsum entry 4ddi Go to PDB code:  Pore analysis for: 4ddi calculated with MOLE 2.0 PDB id 4ddi Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   23 pores, coloured by radius 23 pores, coloured by radius 23 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.35 3.48 28.5 -2.01 -0.60 17.3 85 4 2 5 3 0 0 1   2 2.98 5.18 42.9 -1.94 -0.52 16.1 91 6 0 5 2 1 1 0   3 2.46 5.19 45.6 -2.96 -0.60 33.6 80 8 8 6 2 1 0 1   4 1.93 2.84 46.1 -1.58 -0.55 15.8 87 6 2 4 4 0 1 0   5 1.92 2.80 57.2 -1.85 -0.66 19.1 88 6 4 4 4 0 1 0   6 2.09 2.95 57.4 -1.78 -0.62 19.8 86 8 4 4 4 0 2 0   7 1.41 1.66 57.5 -2.23 -0.73 29.3 86 4 10 3 2 0 0 0   8 2.25 2.83 58.5 -1.77 -0.59 14.8 88 7 2 5 3 1 2 0   9 2.99 5.22 59.7 -1.78 -0.41 16.3 84 5 1 4 3 2 1 0   10 2.38 5.12 61.5 -2.53 -0.68 28.8 83 6 11 6 2 1 0 1   11 2.40 3.54 61.8 -2.27 -0.57 20.7 79 5 6 7 3 0 2 1   12 1.93 2.80 62.0 -1.63 -0.58 17.2 89 6 4 5 5 0 1 0   13 1.93 2.87 82.6 -2.03 -0.54 18.1 85 6 3 6 4 2 1 0   14 1.61 2.31 84.0 -2.81 -0.68 31.8 82 8 12 7 2 0 2 1   15 2.24 2.94 84.5 -1.95 -0.55 17.6 85 7 3 6 4 2 1 0   16 2.16 2.50 104.1 -2.19 -0.63 24.7 87 12 12 11 7 2 2 0   17 2.03 2.83 105.2 -2.18 -0.66 26.0 88 11 14 9 7 1 1 0   18 2.11 2.97 106.8 -1.57 -0.69 14.1 87 6 8 6 6 0 2 0   19 2.19 2.48 108.8 -2.06 -0.61 25.0 88 14 14 9 8 1 2 0   20 2.09 2.91 133.3 -2.12 -0.56 20.6 82 9 8 8 5 2 5 0   21 1.96 2.79 136.0 -1.96 -0.54 17.4 82 9 8 8 6 2 5 0   22 1.55 1.71 26.2 -1.63 -0.48 25.1 84 5 5 2 3 1 0 0   23 1.55 1.72 26.2 -1.63 -0.48 25.1 84 5 5 2 3 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.