PDBsum entry 4dbq Go to PDB code:  Tunnel analysis for: 4dbq calculated with MOLE 2.0 PDB id 4dbq Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.44 2.82 16.9 -0.74 -0.11 13.7 73 2 1 2 2 1 0 0   2 1.84 2.11 17.3 -1.64 -0.53 7.7 75 0 1 3 3 1 0 0   3 1.75 3.25 18.5 -0.47 -0.23 9.6 78 0 2 2 3 0 0 0   4 1.35 1.49 15.5 0.07 0.40 21.1 74 3 0 0 6 0 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.