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PDBsum entry 4d82

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Hydrolase PDB id
4d82
Contents
Protein chains
267 a.a.
Ligands
ADP ×3
Waters ×12

References listed in PDB file
Key reference
Title Asymmetric ring structure of vps4 required for escrt-Iii disassembly.
Authors C.Caillat, P.Macheboeuf, Y.Wu, A.A.Mccarthy, E.Boeri-Erba, G.Effantin, H.G.Göttlinger, W.Weissenhorn, P.Renesto.
Ref. Nat Commun, 2015, 6, 8781. [DOI no: 10.1038/ncomms9781]
PubMed id 26632262
Abstract
The vacuolar protein sorting 4 AAA-ATPase (Vps4) recycles endosomal sorting complexes required for transport (ESCRT-III) polymers from cellular membranes. Here we present a 3.6-Å X-ray structure of ring-shaped Vps4 from Metallosphera sedula (MsVps4), seen as an asymmetric pseudohexamer. Conserved key interface residues are shown to be important for MsVps4 assembly, ATPase activity in vitro, ESCRT-III disassembly in vitro and HIV-1 budding. ADP binding leads to conformational changes within the protomer, which might propagate within the ring structure. All ATP-binding sites are accessible and the pseudohexamer binds six ATP with micromolar affinity in vitro. In contrast, ADP occupies one high-affinity and five low-affinity binding sites in vitro, consistent with conformational asymmetry induced on ATP hydrolysis. The structure represents a snapshot of an assembled Vps4 conformation and provides insight into the molecular motions the ring structure undergoes in a concerted action to couple ATP hydrolysis to ESCRT-III substrate disassembly.
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 Headers

 

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