PDBsum entry 4d1b Go to PDB code:  Tunnel analysis for: 4d1b calculated with MOLE 2.0 PDB id 4d1b Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.24 1.54 45.3 0.79 0.49 1.8 73 0 0 3 15 5 0 1  5FH 1467 A 2 1.24 1.55 46.2 0.93 0.53 1.7 73 0 0 3 15 6 0 1  5FH 1467 A 3 1.11 1.32 65.6 0.04 0.01 3.4 79 1 1 5 15 7 0 1  5FH 1467 A 4 1.42 2.28 20.1 -2.17 -0.32 21.9 78 3 1 2 2 3 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.