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PDBsum entry 4d0w

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protein ligands links
Transferase PDB id
4d0w

 

 

 

 

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Contents
Protein chain
291 a.a.
Ligands
GOL
VVQ
Waters ×156
PDB id:
4d0w
Name: Transferase
Title: Pyrrole-3-carboxamides as potent and selective jak2 inhibitors
Structure: Tyrosine-protein kinase jak2. Chain: a. Fragment: kinase domain, residues 835-1132. Synonym: janus kinase 2, jak-2. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Expressed in: spodoptera frugiperda. Expression_system_taxid: 7108. Expression_system_cell_line: sf21.
Resolution:
1.77Å     R-factor:   0.175     R-free:   0.215
Authors: J.Bertrand,G.Canevari,M.Fasolini,M.G.Brasca,M.Nesi,N.Avanzi, D.Ballinari,T.Bandiera,S.Bindi,D.Carenzi,D.Casero,L.Ceriani, M.Ciomei,A.Cirla,M.Colombo,S.Cribioli,C.Cristiani,F.Della Vedova, G.Fachin,E.R.Felder,A.Galvani,A.Isacchi,D.Mirizzi,I.Motto,A.Panzeri, E.Pesenti,P.Vianello,P.Gnocchi,D.Donati
Key ref: M.G.Brasca et al. (2014). Pyrrole-3-carboxamides as potent and selective JAK2 inhibitors. Bioorg Med Chem Lett, 22, 4998-5012. PubMed id: 25009002 DOI: 10.1016/j.bmc.2014.06.025
Date:
30-Apr-14     Release date:   23-Jul-14    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
O60674  (JAK2_HUMAN) -  Tyrosine-protein kinase JAK2 from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1132 a.a.
291 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.2.7.10.2  - non-specific protein-tyrosine kinase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H+
L-tyrosyl-[protein]
+ ATP
= O-phospho-L-tyrosyl-[protein]
+ ADP
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    Added reference    
 
 
DOI no: 10.1016/j.bmc.2014.06.025 Bioorg Med Chem Lett 22:4998-5012 (2014)
PubMed id: 25009002  
 
 
Pyrrole-3-carboxamides as potent and selective JAK2 inhibitors.
M.G.Brasca, M.Nesi, N.Avanzi, D.Ballinari, T.Bandiera, J.Bertrand, S.Bindi, G.Canevari, D.Carenzi, D.Casero, L.Ceriani, M.Ciomei, A.Cirla, M.Colombo, S.Cribioli, C.Cristiani, F.Della Vedova, G.Fachin, M.Fasolini, E.R.Felder, A.Galvani, A.Isacchi, D.Mirizzi, I.Motto, A.Panzeri, E.Pesenti, P.Vianello, P.Gnocchi, D.Donati.
 
  ABSTRACT  
 
We report herein the discovery, structure guided design, synthesis and biological evaluation of a novel class of JAK2 inhibitors. Optimization of the series led to the identification of the potent and orally bioavailable JAK2 inhibitor 28 (NMS-P953). Compound 28 displayed significant tumour growth inhibition in SET-2 xenograft tumour model, with a mechanism of action confirmed in vivo by typical modulation of known biomarkers, and with a favourable pharmacokinetic and safety profile.
 

 

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