PDBsum entry 4cy5 Go to PDB code:  Tunnel analysis for: 4cy5 calculated with MOLE 2.0 PDB id 4cy5 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.28 1.28 30.9 -1.15 -0.08 17.6 72 5 1 1 1 2 3 1   2 1.31 1.36 15.1 -1.40 -0.21 16.8 70 1 1 0 1 1 1 1   3 1.30 1.35 19.3 -0.89 -0.35 8.0 77 1 0 1 3 1 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.