spacer
spacer

PDBsum entry 4cs8

Go to PDB code: 
Top Page protein metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 4cs8 calculated with MOLE 2.0 PDB id
4cs8
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.65 1.67 23.7 -0.87 -0.14 19.9 86 3 2 3 3 1 0 0  
2 1.46 4.09 26.4 -2.65 -0.58 33.5 84 5 3 3 1 2 0 0  
3 1.61 3.18 30.0 -1.55 -0.43 25.3 79 4 3 1 1 1 0 1  
4 1.67 1.74 33.8 -2.04 -0.27 28.6 84 6 3 2 5 1 0 0  
5 1.18 1.19 54.0 -2.68 -0.56 30.8 80 8 6 6 3 1 0 0  
6 1.18 1.19 59.0 -2.25 -0.65 26.1 81 8 6 6 3 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer