spacer
spacer

PDBsum entry 4crm

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) links
Translation PDB id
4crm
Contents
Protein chains
608 a.a.
282 a.a.
Ligands
ATP
SF4 ×2
ADP
Metals
_MG
Waters ×1

References listed in PDB file
Key reference
Title Cryoelectron microscopic structures of eukaryotic translation termination complexes containing erf1-Erf3 or erf1-Abce1.
Authors A.Preis, A.Heuer, C.Barrio-Garcia, A.Hauser, D.E.Eyler, O.Berninghausen, R.Green, T.Becker, R.Beckmann.
Ref. Cell Rep, 2014, 8, 59-65. [DOI no: 10.1016/j.celrep.2014.04.058]
PubMed id 25001285
Abstract
Termination and ribosome recycling are essential processes in translation. In eukaryotes, a stop codon in the ribosomal A site is decoded by a ternary complex consisting of release factors eRF1 and guanosine triphosphate (GTP)-bound eRF3. After GTP hydrolysis, eRF3 dissociates, and ABCE1 can bind to eRF1-loaded ribosomes to stimulate peptide release and ribosomal subunit dissociation. Here, we present cryoelectron microscopic (cryo-EM) structures of a pretermination complex containing eRF1-eRF3 and a termination/prerecycling complex containing eRF1-ABCE1. eRF1 undergoes drastic conformational changes: its central domain harboring the catalytically important GGQ loop is either packed against eRF3 or swung toward the peptidyl transferase center when bound to ABCE1. Additionally, in complex with eRF3, the N-terminal domain of eRF1 positions the conserved NIKS motif proximal to the stop codon, supporting its suggested role in decoding, yet it appears to be delocalized in the presence of ABCE1. These results suggest that stop codon decoding and peptide release can be uncoupled during termination.
PROCHECK
Go to PROCHECK summary
 Headers

 

spacer

spacer