spacer
spacer

PDBsum entry 4cre

Go to PDB code: 
Top Page protein ligands tunnels links
Tunnel analysis for: 4cre calculated with MOLE 2.0 PDB id
4cre
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.28 1.28 18.4 -1.41 -0.67 17.7 78 3 2 1 0 1 0 0  MVN 1476 A SO4 1481 A
2 1.27 1.27 21.2 -0.62 -0.58 12.3 69 2 2 0 1 0 0 1  MVN 1476 A SO4 1481 A
3 1.46 1.63 17.6 -0.38 -0.24 6.5 85 2 0 1 2 2 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer