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PDBsum entry 4cnm

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Cell adhesion PDB id
4cnm
Contents
Protein chain
283 a.a.
Ligands
NAG-NAG
NAG ×4
PEG ×5
CIT
Waters ×124

References listed in PDB file
Key reference
Title Structural insights into the inhibition of wnt signaling by cancer antigen 5t4/wnt-Activated inhibitory factor 1.
Authors Y.Zhao, T.Malinauskas, K.Harlos, E.Y.Jones.
Ref. Structure, 2014, 22, 612-620. [DOI no: 10.1016/j.str.2014.01.009]
PubMed id 24582434
Abstract
The tumor antigen 5T4/WAIF1 (Wnt-activated inhibitory factor 1; also known as Trophoblast glycoprotein TPBG) is a cell surface protein targeted in multiple cancer immunotherapy clinical trials. Recently, it has been shown that 5T4/WAIF1 inhibits Wnt/β-catenin signaling, a signaling system central to many developmental and pathological processes. Wnt/β-catenin signaling is controlled by multiple inhibitors and activators. Here, we report crystal structures for the extracellular domain of 5T4/WAIF1 at 1.8 Å resolution. They reveal a highly glycosylated, rigid core, comprising eight leucine-rich repeats (LRRs), which serves as a platform to present evolutionarily conserved surface residues in the N-terminal LRR1. Structural and cell-based analyses, coupled with previously reported in vivo data, suggest that Tyr325 plus the LRR1 surface centered on a second exposed aromatic residue, Phe97, are essential for inhibition of Wnt/β-catenin signaling. These results provide a structural basis for the development of 5T4/WAIF1-targeted therapies that preserve or block 5T4/WAIF1-mediated inhibition of Wnt/β-catenin signaling.
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