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PDBsum entry 4ckg

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 4ckg calculated with MOLE 2.0 PDB id
4ckg
Pores calculated on whole structure Pores calculated excluding ligands

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13 pores, coloured by radius 13 pores, coloured by radius 13 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 4.14 5.71 38.8 -2.42 -0.60 34.6 81 6 6 2 5 0 0 0  
2 2.85 3.46 58.6 -2.43 -0.62 31.9 86 11 7 4 4 0 0 0  
3 1.50 4.38 104.6 -1.94 -0.46 26.1 83 8 8 4 7 0 0 0  
4 1.51 4.57 117.0 -2.44 -0.60 32.2 83 12 13 4 6 0 0 0  
5 2.22 4.26 26.2 -1.79 -0.43 23.8 73 6 3 1 2 2 3 0  
6 2.24 4.06 29.4 -1.76 -0.48 22.3 76 7 4 2 2 2 3 0  
7 1.46 1.58 28.3 -0.42 -0.27 13.6 85 2 2 2 4 0 1 0  
8 1.26 1.30 28.9 0.62 0.18 13.6 81 1 4 1 8 0 1 0  
9 1.24 1.30 36.7 1.22 0.33 11.0 84 2 3 1 10 0 0 0  
10 1.40 2.49 95.6 -1.52 -0.41 22.6 80 4 5 4 6 0 3 0  
11 1.26 1.30 28.9 0.62 0.18 13.6 81 1 4 1 8 0 1 0  
12 1.24 1.27 34.5 1.28 0.36 10.2 84 2 2 1 10 0 0 0  
13 1.22 1.41 93.4 -1.67 -0.36 24.8 81 4 6 4 5 0 3 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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