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PDBsum entry 4ci7

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Hydrolase PDB id
4ci7
Contents
Protein chains
456 a.a.
Ligands
SO4 ×2
GOL ×6
PGE ×8
Metals
_CA ×2
Waters ×928

References listed in PDB file
Key reference
Title The structure of the cysteine protease and lectin-Like domains of cwp84, A surface layer-Associated protein from clostridium difficile.
Authors W.J.Bradshaw, J.M.Kirby, N.Thiyagarajan, C.J.Chambers, A.H.Davies, A.K.Roberts, C.C.Shone, K.R.Acharya.
Ref. Acta Crystallogr D Biol Crystallogr, 2014, 70, 1983-1993. [DOI no: 10.1107/S1399004714009997]
PubMed id 25004975
Abstract
Clostridium difficile is a major problem as an aetiological agent for antibiotic-associated diarrhoea. The mechanism by which the bacterium colonizes the gut during infection is poorly understood, but undoubtedly involves a myriad of components present on the bacterial surface. The mechanism of C. difficile surface-layer (S-layer) biogenesis is also largely unknown but involves the post-translational cleavage of a single polypeptide (surface-layer protein A; SlpA) into low- and high-molecular-weight subunits by Cwp84, a surface-located cysteine protease. Here, the first crystal structure of the surface protein Cwp84 is described at 1.4 Å resolution and the key structural components are identified. The truncated Cwp84 active-site mutant (amino-acid residues 33-497; C116A) exhibits three regions: a cleavable propeptide and a cysteine protease domain which exhibits a cathepsin L-like fold followed by a newly identified putative carbohydrate-binding domain with a bound calcium ion, which is referred to here as a lectin-like domain. This study thus provides the first structural insights into Cwp84 and a strong base to elucidate its role in the C. difficile S-layer maturation mechanism.
PROCHECK
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