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PDBsum entry 4cdg

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 4cdg calculated with MOLE 2.0 PDB id
4cdg
Pores calculated on whole structure Pores calculated excluding ligands

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7 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.32 1.33 47.2 0.39 0.00 12.3 83 3 2 1 11 1 1 0  
2 2.83 2.89 48.8 -1.99 -0.46 26.6 85 7 7 2 2 0 1 0  
3 2.51 3.55 53.1 -2.14 -0.56 18.1 92 5 5 8 2 2 0 0  
4 1.85 3.27 63.6 -2.42 -0.56 21.8 89 5 6 9 1 3 0 0  
5 2.50 3.55 73.8 -2.02 -0.46 17.1 88 4 5 8 1 2 1 0  
6 1.90 2.19 84.5 -1.72 -0.55 17.9 80 8 5 9 3 5 5 0  
7 1.68 2.64 125.8 -1.60 -0.26 19.0 83 12 5 10 9 5 1 0  ADP 1634 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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