PDBsum entry 4cbm Go to PDB code:  Tunnel analysis for: 4cbm calculated with MOLE 2.0 PDB id 4cbm Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.57 1.70 16.7 0.73 0.17 13.2 84 2 2 0 5 0 0 0   2 1.54 1.67 22.3 0.31 0.05 13.3 87 2 2 1 6 0 0 0   3 1.34 2.19 18.3 1.52 0.41 5.2 88 1 0 1 4 1 0 0   4 1.38 2.20 19.0 0.43 -0.05 5.5 83 1 0 0 4 1 1 0   5 1.37 3.27 15.3 -0.23 -0.06 10.6 80 1 2 0 6 3 0 0   6 1.36 3.27 16.1 -0.25 0.02 11.5 80 1 2 0 6 3 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.