spacer
spacer

PDBsum entry 4c62

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 4c62 calculated with MOLE 2.0 PDB id
4c62
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
4 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.77 1.98 29.6 -2.41 -0.53 33.9 79 8 5 3 1 1 0 0  
2 2.47 2.83 30.0 -1.29 -0.45 20.4 93 5 2 4 4 0 0 0  PTR 1007 B PTR 1008 B
3 1.78 1.97 37.5 -2.22 -0.44 18.0 76 5 3 5 1 3 0 0  
4 3.13 4.54 40.5 -2.87 -0.69 30.4 82 7 7 6 0 3 0 0  
5 1.44 1.53 69.4 -1.39 -0.41 19.8 78 6 6 2 4 2 3 0  
6 1.34 1.43 77.9 -2.22 -0.54 24.0 78 5 3 4 4 2 1 0  XWW 2135 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer