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PDBsum entry 4c35

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Transferase/inhibitor PDB id
4c35
Contents
Protein chains
341 a.a.
18 a.a.
Ligands
NU3
MPD
Waters ×178

References listed in PDB file
Key reference
Title The discovery of potent ribosomal s6 kinase inhibitors by high-Throughput screening and structure-Guided drug design.
Authors S.Couty, I.M.Westwood, A.Kalusa, C.Cano, J.Travers, K.Boxall, C.L.Chow, S.Burns, J.Schmitt, L.Pickard, C.Barillari, P.C.Mcandrew, P.A.Clarke, S.Linardopoulos, R.J.Griffin, G.W.Aherne, F.I.Raynaud, P.Workman, K.Jones, R.L.Van montfort.
Ref. Oncotarget, 2013, 4, 1647-1661. [DOI no: 10.18632/oncotarget.1255]
PubMed id 24072592
Abstract
The ribosomal P70 S6 kinases play a crucial role in PI3K/mTOR regulated signalling pathways and are therefore potential targets for the treatment of a variety of diseases including diabetes and cancer. In this study we describe the identification of three series of chemically distinct S6K1 inhibitors. In addition, we report a novel PKA-S6K1 chimeric protein with five mutations in or near its ATP-binding site, which was used to determine the binding mode of two of the three inhibitor series, and provided a robust system to aid the optimisation of the oxadiazole-substituted benzimidazole inhibitor series. We show that the resulting oxadiazole-substituted aza-benzimidazole is a potent and ligand efficient S6 kinase inhibitor, which blocks the phosphorylation of RPS6 at Ser235/236 in TSC negative HCV29 human bladder cancer cells by inhibiting S6 kinase activity and thus provides a useful tool compound to investigate the function of S6 kinases.
PROCHECK
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