spacer
spacer

PDBsum entry 4bq6

Go to PDB code: 
protein ligands Protein-protein interface(s) links
Cell adhesion PDB id
4bq6

 

 

 

 

Loading ...

 
JSmol PyMol  
Contents
Protein chains
205 a.a.
15 a.a.
148 a.a.
16 a.a.
Ligands
NAG ×2
Waters ×329
PDB id:
4bq6
Name: Cell adhesion
Title: Crystal structure of the rgmb-neo1 complex form 1
Structure: Neogenin. Chain: a, b. Fragment: fn-type iii domains 5 and 6, residues 883-1133. Engineered: yes. Other_details: n-linked glycosylation at n940. Rgm domain family member b. Chain: c, e. Fragment: ectodomain, residues 50-168. Synonym: repulsive guidance molecule b, drg11-responsive axonal
Source: Mus musculus. House mouse. Organism_taxid: 10090. Expressed in: homo sapiens. Expression_system_taxid: 9606. Expression_system_cell_line: hek293t. Homo sapiens. Human. Organism_taxid: 9606.
Resolution:
2.30Å     R-factor:   0.220     R-free:   0.267
Authors: C.H.Bell,E.Healey,S.Van Erp,B.Bishop,C.Tang,R.J.C.Gilbert, A.R.Aricescu,R.J.Pasterkamp,C.Siebold
Key ref: C.H.Bell et al. (2013). Structure of the repulsive guidance molecule (RGM)-neogenin signaling hub. Science, 341, 77-80. PubMed id: 23744777 DOI: 10.1126/science.1232322
Date:
30-May-13     Release date:   12-Jun-13    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
P97798  (NEO1_MOUSE) -  Neogenin from Mus musculus
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1492 a.a.
205 a.a.
Protein chain
Pfam   ArchSchema ?
Q6NW40  (RGMB_HUMAN) -  Repulsive guidance molecule B from Homo sapiens
Seq:
Struc:
437 a.a.
15 a.a.*
Protein chains
Pfam   ArchSchema ?
Q6NW40  (RGMB_HUMAN) -  Repulsive guidance molecule B from Homo sapiens
Seq:
Struc:
437 a.a.
148 a.a.*
Protein chain
Pfam   ArchSchema ?
Q6NW40  (RGMB_HUMAN) -  Repulsive guidance molecule B from Homo sapiens
Seq:
Struc:
437 a.a.
16 a.a.
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 4 residue positions (black crosses)

 

 
DOI no: 10.1126/science.1232322 Science 341:77-80 (2013)
PubMed id: 23744777  
 
 
Structure of the repulsive guidance molecule (RGM)-neogenin signaling hub.
C.H.Bell, E.Healey, S.van Erp, B.Bishop, C.Tang, R.J.Gilbert, A.R.Aricescu, R.J.Pasterkamp, C.Siebold.
 
  ABSTRACT  
 
Repulsive guidance molecule family members (RGMs) control fundamental and diverse cellular processes, including motility and adhesion, immune cell regulation, and systemic iron metabolism. However, it is not known how RGMs initiate signaling through their common cell-surface receptor, neogenin (NEO1). Here, we present crystal structures of the NEO1 RGM-binding region and its complex with human RGMB (also called dragon). The RGMB structure reveals a previously unknown protein fold and a functionally important autocatalytic cleavage mechanism and provides a framework to explain numerous disease-linked mutations in RGMs. In the complex, two RGMB ectodomains conformationally stabilize the juxtamembrane regions of two NEO1 receptors in a pH-dependent manner. We demonstrate that all RGM-NEO1 complexes share this architecture, which therefore represents the core of multiple signaling pathways.
 

 

spacer

spacer