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PDBsum entry 4bkj

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Pore analysis for: 4bkj calculated with MOLE 2.0 PDB id
4bkj
Pores calculated on whole structure Pores calculated excluding ligands

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1 pore, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.27 1.63 25.7 0.13 -0.01 14.9 80 2 3 0 4 3 0 0  STI 1000 A
2 1.63 1.89 79.7 -0.65 -0.14 18.4 78 6 6 3 8 3 1 0  STI 1000 A
3 1.32 1.42 86.6 -0.20 -0.03 16.4 78 6 7 2 14 4 1 0  STI 1000 A
4 1.50 1.78 27.7 0.65 0.28 9.8 76 2 0 2 4 3 0 0  STI 1000 B
5 2.00 2.05 37.6 0.59 0.32 14.0 83 2 3 1 8 2 0 0  EDO 1010 A STI 1000 B
6 1.27 1.62 39.7 1.34 0.48 8.4 80 2 3 1 12 4 0 0  STI 1000 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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