PDBsum entry 4bjl Go to PDB code:  Tunnel analysis for: 4bjl calculated with MOLE 2.0 PDB id 4bjl Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.16 2.51 21.1 -0.59 -0.42 8.2 94 0 1 4 3 1 0 0   2 1.39 1.77 16.1 -0.62 -0.51 3.8 79 0 1 1 2 2 2 0   3 1.45 1.45 16.9 -0.62 -0.44 3.6 82 0 1 2 1 1 3 0   4 1.40 1.77 17.9 -0.36 -0.43 6.8 67 1 1 1 1 2 2 0   5 1.31 1.77 20.2 -0.22 -0.43 2.1 81 0 0 4 1 2 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.