 |
PDBsum entry 4bhh
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 4bhh calculated with MOLE 2.0
|
PDB id
|
|
|
|
4bhh
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
6 pores,
coloured by radius |
 |
6 pores,
coloured by radius
|
6 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.97 |
2.14 |
30.9 |
-2.05 |
-0.58 |
24.7 |
78 |
 |
3 |
2 |
2 |
2 |
0 |
0 |
0 |
 |
U 1 R
|
 |
 |
2 |
 |
3.34 |
3.35 |
35.2 |
-1.27 |
-0.60 |
11.8 |
80 |
3 |
0 |
1 |
2 |
0 |
2 |
0 |
U 7 R U 19 R U 20 R U 23 R U 24 R U 29 R U 30 R U 31 R U 41 R
|
 |
3 |
 |
3.10 |
3.31 |
42.4 |
-1.76 |
-0.48 |
20.0 |
82 |
4 |
2 |
3 |
3 |
2 |
1 |
0 |
U 8 R U 9 R U 12 R U 14 R U 18 R U 19 R U 23 R U 24 R
|
 |
4 |
 |
1.57 |
1.61 |
67.9 |
-1.48 |
-0.37 |
16.4 |
87 |
5 |
3 |
5 |
5 |
2 |
2 |
0 |
U 7 R U 34 R U 40 R U 41 R
|
 |
5 |
 |
1.14 |
2.47 |
71.9 |
-0.53 |
-0.14 |
13.3 |
73 |
4 |
2 |
3 |
9 |
4 |
2 |
0 |
U 9 R U 10 R U 18 R U 19 R U 23 R U 24 R
|
 |
6 |
 |
1.65 |
1.82 |
97.8 |
-2.26 |
-0.44 |
25.9 |
80 |
9 |
4 |
5 |
2 |
3 |
3 |
0 |
U 19 R U 23 R U 24 R U 34 R
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |