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PDBsum entry 4bhh

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Top Page protein dna_rna Protein-protein interface(s) pores links
Pore analysis for: 4bhh calculated with MOLE 2.0 PDB id
4bhh
Pores calculated on whole structure Pores calculated excluding ligands

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6 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.97 2.14 30.9 -2.05 -0.58 24.7 78 3 2 2 2 0 0 0  U 1 R
2 3.34 3.35 35.2 -1.27 -0.60 11.8 80 3 0 1 2 0 2 0  U 7 R U 19 R U 20 R U 23 R U 24 R U 29 R U 30 R U
31 R U 41 R
3 3.10 3.31 42.4 -1.76 -0.48 20.0 82 4 2 3 3 2 1 0  U 8 R U 9 R U 12 R U 14 R U 18 R U 19 R U 23 R U
24 R
4 1.57 1.61 67.9 -1.48 -0.37 16.4 87 5 3 5 5 2 2 0  U 7 R U 34 R U 40 R U 41 R
5 1.14 2.47 71.9 -0.53 -0.14 13.3 73 4 2 3 9 4 2 0  U 9 R U 10 R U 18 R U 19 R U 23 R U 24 R
6 1.65 1.82 97.8 -2.26 -0.44 25.9 80 9 4 5 2 3 3 0  U 19 R U 23 R U 24 R U 34 R

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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