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PDBsum entry 4be7

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 4be7 calculated with MOLE 2.0 PDB id
4be7
Pores calculated on whole structure Pores calculated excluding ligands

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10 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.47 4.23 30.8 -2.73 -0.67 21.4 87 2 2 7 2 0 1 0  
2 1.45 1.96 54.6 -1.69 -0.48 25.4 84 7 7 3 5 1 0 0  ATP 1887 B MG 1890 B PO4 1890 D
3 1.38 1.51 61.7 -1.75 -0.54 18.9 91 3 7 6 4 1 0 0  
4 1.36 1.50 85.8 -2.36 -0.58 25.8 86 4 8 4 1 3 0 0  
5 1.40 1.92 90.7 -2.05 -0.52 23.8 82 11 7 8 4 4 0 0  PO4 1890 D
6 1.33 1.68 112.7 -2.10 -0.42 28.2 82 13 10 6 8 4 0 0  PO4 1890 D
7 1.21 1.21 29.1 0.44 0.34 15.2 79 4 1 1 6 3 0 0  
8 1.36 1.53 54.8 -1.14 -0.44 20.3 85 6 7 3 3 1 0 0  MG 1886 D ATP 1887 D
9 1.28 1.42 75.0 -2.02 -0.45 26.2 82 10 6 6 6 3 0 0  PO4 1888 B
10 1.29 1.85 87.7 -1.50 -0.34 20.5 86 9 6 8 4 3 1 0  
11 1.45 1.64 106.5 -1.95 -0.45 21.6 82 12 6 10 4 4 1 0  PO4 1888 B
12 1.27 1.34 120.2 -1.64 -0.47 22.8 84 7 11 4 5 5 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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