 |
PDBsum entry 4bcm
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 4bcm calculated with  MOLE 2.0
|
PDB id
|
|
|
|
4bcm
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pores calculated on whole structure |
|
Pores calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
10 pores,
coloured by radius |
|
5 pores,
coloured by radius
|
5 pores,
coloured as in
list below
|
|
|
|
|
|
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
2.41 |
2.43 |
33.9 |
-2.32 |
-0.51 |
26.5 |
79 |
|
4 |
2 |
1 |
1 |
0 |
1 |
0 |
|
|
 |
|
2 |
 |
2.41 |
2.44 |
72.0 |
-2.16 |
-0.57 |
23.8 |
84 |
8 |
5 |
5 |
3 |
1 |
3 |
0 |
SGM 1429 D
|
|
3 |
 |
2.37 |
2.60 |
74.4 |
-2.01 |
-0.56 |
23.1 |
87 |
7 |
4 |
4 |
1 |
0 |
2 |
0 |
SGM 1429 D
|
|
4 |
 |
1.80 |
1.69 |
228.8 |
-2.04 |
-0.37 |
23.3 |
81 |
15 |
10 |
7 |
5 |
3 |
5 |
1 |
|
 |
5 |
 |
2.33 |
3.78 |
39.0 |
-0.08 |
-0.09 |
13.8 |
82 |
1 |
3 |
2 |
5 |
2 |
0 |
0 |
T7Z 1295 C
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program