PDBsum entry 4bbs Go to PDB code:  Pore analysis for: 4bbs calculated with MOLE 2.0 PDB id 4bbs Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   26 pores, coloured by radius 22 pores, coloured by radius 22 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.86 3.96 35.1 -1.94 -0.43 26.7 76 6 4 0 3 1 1 0   2 2.80 2.80 39.2 -1.87 -0.69 19.9 86 3 3 3 1 0 0 0   3 1.84 1.91 46.5 -1.65 -0.46 19.6 85 4 5 5 4 2 1 0   4 3.52 4.17 50.6 -2.37 -0.56 25.9 82 4 4 6 5 0 3 0   5 3.47 3.47 52.4 -1.51 -0.53 26.0 83 8 9 1 5 0 1 0  DG 1 N DC 2 N DT 17 T 6 2.65 2.82 54.9 -1.03 -0.53 16.6 84 9 6 3 2 2 1 0   7 2.64 2.82 68.4 -0.69 -0.46 12.3 84 5 6 4 4 2 3 0  DG 1 N DC 2 N DT 17 T 8 1.53 3.00 69.1 -2.04 -0.48 28.5 83 8 7 5 4 2 1 0   9 1.80 1.92 84.6 -2.49 -0.65 26.8 83 10 8 8 3 1 1 0  A 5 P U 6 P DT 17 T DA 18 T DT 19 T DA 21 T DT 22 T DT 24 T DT 25 T DT 26 T 10 1.65 2.01 86.0 -0.73 -0.33 13.4 85 4 7 8 9 1 3 0  A 5 P U 6 P DT 17 T DA 18 T DT 19 T DA 21 T DT 22 T 11 2.10 2.44 85.3 -1.87 -0.35 23.5 84 7 7 6 3 1 1 0   12 3.13 3.29 88.8 -1.76 -0.63 24.5 84 6 11 7 8 0 0 0   13 1.87 4.74 97.8 -1.97 -0.29 24.1 78 12 4 9 5 4 2 0  DT 26 T 14 2.02 2.32 99.8 -2.00 -0.40 24.9 85 8 9 9 3 1 1 0   15 2.88 4.00 103.6 -1.53 -0.52 21.4 81 8 11 7 9 1 1 0   16 2.08 2.15 112.9 -2.34 -0.65 21.9 85 12 9 11 3 2 2 0  MG 2459 A A 5 P U 6 P A 7 P U 8 P C 9 P A 10 P DA 18 T DT 19 T DA 21 T DT 22 T DT 24 T DT 25 T DT 26 T 17 1.56 2.39 113.5 -1.75 -0.45 21.9 82 15 9 11 6 4 3 0  DT 25 T DT 26 T 18 1.71 2.64 122.7 -1.77 -0.52 23.9 83 12 13 9 5 3 2 0  A 5 P U 6 P DT 17 T DA 18 T DT 19 T DA 21 T DT 22 T DT 24 T 19 2.68 2.82 132.9 -1.47 -0.31 21.1 83 12 9 9 9 3 4 0   20 1.54 3.01 153.9 -1.73 -0.39 23.4 83 15 12 13 9 3 2 0   21 2.24 2.24 160.3 -1.81 -0.63 20.0 84 18 11 14 5 1 0 0  DA 6 N DT 14 T DG 15 T DC 16 T DT 17 T 22 1.58 2.00 177.7 -1.33 -0.42 18.0 85 11 14 11 11 3 4 0  MG 2459 A A 5 P U 6 P A 7 P U 8 P C 9 P A 10 P DA 18 T DT 19 T DA 21 T DT 22 T Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.