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PDBsum entry 4bbh

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 4bbh calculated with MOLE 2.0 PDB id
4bbh
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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7 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.33 1.47 31.7 0.64 0.32 3.2 76 0 1 3 7 6 0 0  YBN 1001 C
2 1.35 1.50 38.4 0.15 0.33 9.0 74 1 2 3 6 8 0 0  YBN 1001 C
3 1.33 1.46 47.8 0.87 0.39 3.2 77 2 0 4 11 8 0 0  NHW 1000 C YBN 1001 C
4 1.36 1.49 59.8 0.55 0.43 1.6 78 0 0 5 13 10 1 0  NHW 1000 C YBN 1001 C
5 1.17 1.42 122.1 -0.64 -0.10 11.9 79 10 5 10 12 11 1 0  NHW 1000 C YBN 1001 C
6 1.08 1.34 29.7 -0.36 0.01 10.6 84 0 3 4 3 1 1 0  DMS 999 C

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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