PDBsum entry 4b8c

Pore analysis for: 4b8c calculated with

MOLE 2.0

PDB id

4b8c

Pores calculated on whole structure

Pores calculated excluding ligands

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18 pores, coloured by radius

18 pores, coloured by radius

18 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.15

1.16

34.3

-1.18

-0.42

11.7

78

3

2

2

0

2

0

1

2

1.19

1.23

35.8

-0.99

-0.56

11.5

89

4

2

6

1

3

0

0

3

1.18

1.18

38.5

-1.82

-0.48

16.2

72

4

4

5

0

5

2

0

4

1.72

1.72

47.3

-1.39

-0.42

13.1

80

3

4

9

1

5

2

0

5

2.54

2.77

49.6

-3.04

-0.61

29.4

83

4

4

5

0

2

0

0

6

2.29

3.39

58.0

-2.53

-0.51

23.3

83

8

8

9

1

4

0

0

7

2.61

2.81

62.5

-2.06

-0.35

22.2

74

6

8

5

3

6

2

0

8

1.19

1.18

66.4

-1.81

-0.26

19.1

75

7

8

6

2

8

1

0

9

1.73

1.94

67.9

-1.57

-0.29

19.8

77

8

5

6

6

4

3

0

10

1.31

1.30

73.1

-0.43

-0.08

8.1

72

5

4

4

6

4

3

1

11

1.16

1.21

79.6

-1.54

-0.31

18.1

78

9

5

7

5

6

3

0

12

1.68

2.85

79.9

-1.58

-0.28

16.8

80

6

8

10

3

8

1

0

13

1.62

2.00

90.1

-1.41

-0.32

16.6

82

8

5

11

5

6

3

0

14

1.64

3.42

103.3

-0.81

-0.12

12.1

79

5

6

11

8

7

3

0

15

2.25

3.34

42.0

-2.88

-0.77

25.1

87

6

5

7

1

1

0

0

16

1.66

1.88

34.1

-0.54

0.37

18.8

71

3

1

1

3

5

0

0

17

1.93

2.11

51.9

-0.88

0.14

19.4

79

5

1

2

4

3

0

0

18

1.69

1.90

33.9

-0.54

0.37

18.8

71

3

1

1

3

5

0

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.