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PDBsum entry 4b6f

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 4b6f calculated with MOLE 2.0 PDB id
4b6f
Pores calculated on whole structure Pores calculated excluding ligands

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13 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.21 1.34 76.2 -1.48 -0.56 19.9 90 7 8 7 6 0 1 0  20L 1722 B
2 1.21 1.32 108.4 -1.45 -0.57 15.3 87 8 5 8 7 0 5 0  
3 2.22 2.27 117.4 -1.24 -0.48 14.7 90 6 12 12 11 1 2 0  20L 1722 A 20L 1722 B
4 1.37 1.38 123.6 -1.31 -0.44 21.0 88 12 11 8 8 2 1 0  SO4 1721 A
5 2.42 2.42 128.3 -1.07 -0.37 16.8 91 10 10 11 10 2 0 0  SO4 1721 A 20L 1722 B
6 1.29 2.09 148.4 -1.20 -0.49 12.2 88 8 8 14 11 1 6 0  20L 1722 A
7 1.48 2.20 173.2 -1.08 -0.39 14.2 88 14 8 13 12 2 5 0  SO4 1721 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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