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PDBsum entry 4ayt
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Tunnel analysis for: 4ayt calculated with  MOLE 2.0
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PDB id
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4ayt
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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5 tunnels,
coloured by tunnel radius |
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7 tunnels,
coloured by
tunnel radius
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7 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.50 |
1.50 |
19.0 |
-0.04 |
-0.29 |
5.5 |
84 |
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1 |
2 |
3 |
6 |
0 |
0 |
0 |
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2 |
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1.41 |
2.87 |
19.8 |
0.06 |
-0.04 |
11.6 |
85 |
0 |
3 |
2 |
5 |
0 |
0 |
0 |
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3 |
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1.44 |
1.44 |
19.9 |
0.22 |
-0.23 |
4.6 |
79 |
1 |
2 |
1 |
7 |
0 |
0 |
0 |
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4 |
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1.67 |
3.07 |
15.2 |
2.29 |
0.47 |
1.2 |
89 |
0 |
0 |
0 |
6 |
2 |
0 |
0 |
LMT 1723 A
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5 |
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1.67 |
3.07 |
16.0 |
3.37 |
0.90 |
0.5 |
86 |
0 |
0 |
0 |
8 |
1 |
1 |
0 |
LMT 1723 A
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6 |
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1.66 |
3.07 |
27.4 |
2.29 |
0.49 |
1.0 |
92 |
0 |
0 |
1 |
7 |
1 |
1 |
0 |
LMT 1723 A
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7 |
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1.28 |
1.49 |
15.5 |
-0.72 |
-0.16 |
15.1 |
81 |
1 |
2 |
0 |
3 |
0 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program